2026-03-01
Prof. Russell E. Lewis
Department of Molecular Medicine
University of Padua
russelledward.lewis@unipd.it
https://github.com/Russlewisbo
slides available at: www.padovaid.com
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After completing this lecture, learners will be able to:
Part 1: Foundations (~30 min)
Part 2: Applications (~45 min)
Case Introduction
A 65-year-old man with Pseudomonas aeruginosa pneumonia is started on piperacillin-tazobactam 4.5g IV q8h.
On day 3, he’s not improving. The MIC comes back as 16 mg/L (susceptible breakpoint).
What would you do?
Options to consider:
We’ll return to this case at the end of the lecture…
What is pharmacology?
Definition
Pharmacology: The study concerning a compound related to its history, source, physical and chemical properties, compounding, biochemical and physiologic effects, mechanisms of action and resistance, absorption, distribution, metabolism, excretion, and therapeutic and other uses
Two key components:
Drug → Pathogen
Drug → Host
Drug → Microbiome
Key parameters from the curve:
| Parameter | Symbol | Definition |
|---|---|---|
| Peak concentration | Cmax | Highest concentration achieved |
| Trough concentration | Cmin | Lowest concentration (before next dose) |
| Area under curve | AUC | Total drug exposure over time |
| Half-life | t½ | Time for concentration to decrease by 50% |
Half-life (t½) = Time required for the plasma concentration to decrease by 50%
Clinical implications:
| Drug | Half-life | Typical Dosing |
|---|---|---|
| Piperacillin | 1 hour | q6-8h |
| Ceftriaxone | 8 hours | q24h |
| Azithromycin | 68 hours | Once daily × 3-5 days |
Key principles:
Clinical pearl
Don’t check “steady state” levels too early—the result won’t reflect true exposure!
Bioavailability (F)
Fraction of administered dose reaching systemic circulation
IV administration: F = 100% (by definition)
Oral administration: F varies widely
Factors affecting oral bioavailability:
| Drug | Oral Bioavailability | Clinical Note |
|---|---|---|
| Levofloxacin | ~100% | Oral = IV |
| Metronidazole | ~100% | Oral = IV |
| Amoxicillin | 70-90% | Good absorption |
| Posaconazole (suspension) | Variable | Food dependent |
| Oral vancomycin | <5% | Stays in GI tract |
IV-to-Oral conversion
High bioavailability drugs are excellent candidates for early IV-to-oral conversion—same exposure, lower cost, earlier discharge!
Clinical significance:
Warning
Antibiotics can reduce MPA levels in transplant patients → rejection risk!
Volume of distribution (Vd)
A proportionality constant relating plasma concentration to total amount of drug in the body
\[V_d = \frac{\text{Amount of drug in body}}{\text{Plasma concentration}}\]
Important concept: Vd is NOT a physiologic volume!
| Vd Value | Interpretation |
|---|---|
| ~3 L | Confined to plasma |
| ~14 L | Extracellular fluid |
| ~42 L | Total body water |
| >42 L | Extensive tissue binding |
Drug properties:
Patient factors:
| Drug Type | Binding Protein | Effect on Vd |
|---|---|---|
| Acidic (β-lactams) | Albumin | Lower Vd |
| Basic (macrolides) | α₁-acid glycoprotein | Higher Vd |
Only UNBOUND drug is pharmacologically active!
Why it matters:
Clinical scenarios:
Example: Ceftriaxone
85-95% protein bound → only 5-15% is active. In hypoalbuminemia, free fraction increases → potential toxicity and altered PK
Cytochrome P450 system
Heme-containing enzymes in the liver (and gut) that oxidize drugs
Primary CYP enzymes (by importance for drugs):
CYP nomenclature: CYP3A4 = Family 3, Subfamily A, Gene 4
CYP2C19 Example
Polymorphisms create distinct metabolizer phenotypes:
| Phenotype | Frequency | Clinical Effect |
|---|---|---|
| Poor metabolizer | 2-5% Caucasians, 15-20% Asians | ↑ Drug levels |
| Intermediate metabolizer | 25-35% | Moderately ↑ levels |
| Extensive metabolizer | 35-50% | Normal metabolism |
| Ultrarapid metabolizer | 5-10% | ↓ Drug levels |
Voriconazole: CYP2C19 poor metabolizers have 4× higher exposure → toxicity risk
Examples of boosted regimens:
Total Clearance = Renal + Nonrenal
Renal elimination mechanisms:
Primarily renally cleared:
Nonrenal routes:
| Drug | Primary Elimination | Dose Adjustment |
|---|---|---|
| Ceftriaxone | 40% biliary | None for renal impairment |
| Metronidazole | Hepatic | Reduce in liver failure |
| Azithromycin | Biliary/fecal | None for renal impairment |
Minimum Inhibitory Concentration (MIC)
The lowest concentration of an antimicrobial that inhibits visible growth of a microorganism after overnight incubation
Key points:
What an MIC doesn’t tell us…
The Solution: PK-PD Integration
Combine MIC with pharmacokinetic parameters to predict clinical outcomes
| Index | Formula | What It Measures |
|---|---|---|
| Cmax/MIC | Peak / MIC | Intensity of exposure |
| AUC/MIC | AUC₀₋₂₄ / MIC | Total exposure relative to potency |
| T > MIC | % time above MIC | Duration of effective exposure |
Key Insight
The “best” index depends on the antibiotic’s mechanism of action and killing characteristics. May be reported as total drug or fraction unbound (FU)- i.e. non protein bound drug
| Antibiotic Class | Primary Index | Target |
|---|---|---|
| Aminoglycosides | Cmax/MIC | 8-10 |
| Fluoroquinolones | AUC/MIC (or Cmax/MIC) | 30-50 (Gram+), 100-125 (Gram-) |
| β-Lactams | T > MIC | 40-70% of interval |
| Vancomycin | AUC/MIC | 400-600 |
| Daptomycin | AUC/MIC (or Cmax/MIC) | Variable |
| Linezolid | AUC/MIC | 80-120 |
Characteristics:
Agents:
Classic Study: Blaser et al.
Examined Cmax/MIC ratios for enoxacin and netilmicin against Gram-negative organisms:
| Cmax/MIC Ratio | Outcome |
|---|---|
| < 8 | Bacterial regrowth in ALL cultures |
| ≥ 8 | Sustained killing |
Critical finding: When antibiotics were redosed after regrowth at sub-optimal ratios, NO killing occurred due to resistance emergence
Duration above MIC = Efficacy
Characteristics:
Agents:
Classic Data: S.pneumoniae studies
Treatment with penicillins or cephalosporins showed dramatic mortality differences:
| T > MIC | Mortality |
|---|---|
| ≤ 20% of dosing interval | 100% |
| 40-50% of dosing interval | 0-10% |
Target T > MIC:
Definition
Suppression of bacterial growth that persists after drug concentrations fall below MIC
| Antibiotic Class | PAE: Gram-negative | PAE: Gram-positive |
|---|---|---|
| Aminoglycosides | 2-6 hours | 2 hours |
| Fluoroquinolones | 2-6 hours | 2 hours |
| Carbapenems | 1-2 hours | 2 hours |
| Penicillins | Little/none | 2 hours |
| Cephalosporins | Little/none | 2 hours |
Long PAE:
Short/No PAE:
PAE enhancement
PAE can be prolonged by: - Higher drug concentrations - Longer exposure duration - Sub-inhibitory concentrations
Three complementary approaches:
How it works:
Advantages:
Limitations:
From bench to bedside:
Challenge
Population average doses may not achieve targets in all patients—especially critically ill!
The revolution in aminoglycoside dosing!
Traditional: 1-2 mg/kg q8h → Modern: 5-7 mg/kg q24h
| Parameter | Traditional | Extended-Interval |
|---|---|---|
| Peak (Cmax) | 5-10 mg/L | 15-25 mg/L |
| Trough | <2 mg/L | <1 mg/L |
| Cmax/MIC | Often <8 | 8-10 |
| Nephrotoxicity | Higher | Lower |
| Efficacy | Variable | Optimized |
Why it works:
Target
Achieve Cmax/MIC of 8-10 based on expected MIC90 of target organisms
| Strategy | Infusion Time | T > MIC | Daily Dose |
|---|---|---|---|
| Intermittent | 30 min | Lowest | Standard |
| Extended | 3-4 hours | Higher | Same or lower |
| Continuous | 24 hours | 100% | Often lower |
Always give a loading dose:
| Evidence | Findings |
|---|---|
| Meta-analysis (Rhodes 2018) | 1.46× lower mortality with prolonged pip-tazo |
| Meta-analysis (Falagas 2013) | Lower mortality with prolonged carbapenems |
| BLING-II RCT | Comparable 90-day survival |
| BLISS RCT | Comparable outcomes |
Why RCTs show less benefit
Why PK is altered in critical illness:
↑ Volume of distribution:
Altered Clearance:
Important
Standard doses often underdose critically ill patients initially, then overdose as organ function changes. DALI study: More than one-third of critically Ill patients to not acheive minimum dosing targets!
Commonly monitored antiinfectives
Aminoglycosides, vancomycin, voriconazole, posaconazole, flucytosine
Old Paradigm:
New Paradigm (2020 Guidelines):
Key Change
Troughs of 15-20 mg/L often give AUC/MIC >600 → increased nephrotoxicity without added benefit
Option 1: Two-Sample Method
Option 2: Bayesian Estimation
Practical Tip
Many institutions are implementing Bayesian vancomycin dosing software (e.g., DoseMeRx, InsightRx)
Why TDM is important for triazoles:
| Drug | Issue | Target Range |
|---|---|---|
| Voriconazole | CYP2C19 polymorphism | 1-5 mg/L |
| Itraconazole | Variable absorption | ≥0.5-1 mg/L |
| Posaconazole | Food-dependent absorption | ≥0.7-1 mg/L |
Voriconazole toxicity
Levels >5.5 mg/L associated with:
Visual disturbances
Hepatotoxicity
CNS effects
Hallucinations
What makes ARVs different:
The Therapeutic Window
Antiretrovirals must achieve concentrations that:
Suppress viral replication (efficacy)
Don’t cause toxicity
Prevent resistance emergence
Clinical Scenario
62-year-old man, 80 kg, CrCl 90 mL/min, with hospital-acquired pneumonia. You want to start tobramycin. MIC90 of P. aeruginosa at your hospital is 2 mg/L.
Traditional dosing: 1.5 mg/kg q8h = 120 mg q8h Peak expected: ~5-6 mg/L → Cmax/MIC = 2.5-3 ❌
Extended-interval: 7 mg/kg q24h = 560 mg q24h Peak expected: ~20 mg/L → Cmax/MIC = 10 ✓
Answer: Extended-interval dosing achieves the PK-PD target of 8-10
Clinical Scenario
55-year-old woman with P. aeruginosa bloodstream infection. Piperacillin MIC = 16 mg/L (susceptible). Started on pip-tazo 4.5g q8h (30-min infusion).
Day 3: Still febrile, blood cultures remain positive.
Analysis:
Solution: Extended infusion 4.5g q8h over 4 hours (with loading dose) OR increase to q6h dosing
Clinical Scenario
45-year-old man with MRSA bacteremia (MIC = 1 mg/L). Started on vancomycin 1.5g q12h. Day 3 trough = 22 mg/L.
Old approach: Trough in target range (15-20)—maybe even too high. Continue same dose?
New approach: Using Bayesian software, estimated AUC = 680 mg·h/L - AUC/MIC = 680 (target: 400-600) - This patient is overexposed → nephrotoxicity risk
Action: Reduce dose to target AUC/MIC of 400-600
Remember Our Patient?
65-year-old man with P. aeruginosa pneumonia on pip-tazo 4.5g q8h, not improving. MIC = 16 mg/L.
Now you can answer:
Know your PK-PD index:
Cmax/MIC: aminoglycosides, fluoroquinolones
AUC/MIC: vancomycin, fluoroquinolones
T > MIC: β-lactams 2.
Match dosing strategy to PK-PD:
Concentration-dependent → maximize peak
Time-dependent → maximize duration
Remember special populations:
Critically ill patients often need higher/more frequent doses initially
TDM helps individualize therapy
| Drug Class | Strategy | Rationale |
|---|---|---|
| Aminoglycosides | Once-daily high dose | Optimize Cmax/MIC, minimize toxicity |
| Fluoroquinolones | Higher doses when possible | Cmax/MIC and AUC/MIC |
| β-Lactams | Extended/continuous infusion | Maximize T > MIC |
| Vancomycin | AUC-based dosing | Target AUC/MIC 400-600 |
| Azoles | TDM-guided | High variability |
PK-PD integration is essential for optimizing anti-infective therapy
Underdosing is common and promotes resistance
One size doesn’t fit all—individualize based on patient and pathogen
Extended/continuous infusions can rescue patients failing standard β-lactam dosing
TDM is your tool for precision antiinfective therapy
Apply these principles every time you write an antibiotic order!
| Abbreviation | Definition |
|---|---|
| F | Bioavailability |
| Vd | Volume of distribution |
| CL | Clearance |
| t½ | Half-life |
| Cmax | Maximum concentration |
| Cmin | Minimum/trough concentration |
| AUC | Area under the concentration-time curve |
| MIC | Minimum inhibitory concentration |
| PAE | Post-antibiotic effect |
| T > MIC | Time above MIC |
| TDM | Therapeutic drug monitoring |